Protein–RNA interactions for Protein: Q9CR55

UPF0547 protein C16orf87 homolog, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Q9CR55 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Q9CR55 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 Gm27045-201ENSMUST00000182145 1402 ntBASIC15.71■□□□□ 0.11
Q9CR55 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC15.71■□□□□ 0.11
Q9CR55 Gm42642-201ENSMUST00000200683 355 ntBASIC15.71■□□□□ 0.11
Q9CR55 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Q9CR55 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Q9CR55 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Q9CR55 Tekt5-201ENSMUST00000043415 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Q9CR55 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
Q9CR55 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Q9CR55 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Q9CR55 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Q9CR55 AC099934.2-201ENSMUST00000196389 70 ntBASIC15.7■□□□□ 0.1
Q9CR55 AC156953.1-201ENSMUST00000196953 70 ntBASIC15.7■□□□□ 0.1
Q9CR55 AC157822.2-201ENSMUST00000200291 70 ntBASIC15.7■□□□□ 0.1
Q9CR55 Myadml2-201ENSMUST00000026134 931 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC15.7■□□□□ 0.1
Q9CR55 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC15.7■□□□□ 0.1
Q9CR55 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC15.7■□□□□ 0.1
Q9CR55 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC15.7■□□□□ 0.1
Q9CR55 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Q9CR55 Slc35d2-201ENSMUST00000099441 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Gm11841-201ENSMUST00000117060 1963 ntBASIC15.69■□□□□ 0.1
Q9CR55 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Q9CR55 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Q9CR55 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Q9CR55 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Gm7291-201ENSMUST00000199147 382 ntBASIC15.69■□□□□ 0.1
Q9CR55 Gm42569-201ENSMUST00000200539 472 ntBASIC15.69■□□□□ 0.1
Q9CR55 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
Q9CR55 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Q9CR55 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Gm11190-201ENSMUST00000132487 3414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Grin3b-201ENSMUST00000045085 3283 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Q9CR55 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.68■□□□□ 0.1
Q9CR55 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
Q9CR55 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Angptl6-201ENSMUST00000043726 1582 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Zfp771-201ENSMUST00000052509 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Fev-201ENSMUST00000068631 1490 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Q9CR55 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC15.68■□□□□ 0.1
Q9CR55 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.68■□□□□ 0.1
Q9CR55 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC15.68■□□□□ 0.1
Q9CR55 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC15.68■□□□□ 0.1
Q9CR55 Cisd1-201ENSMUST00000045887 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Ptch1-201ENSMUST00000021921 7725 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.68■□□□□ 0.1
Q9CR55 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Q9CR55 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC15.67■□□□□ 0.1
Q9CR55 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms