Protein–RNA interactions for Protein: Q9CQV4

Retreg3, Reticulophagy regulator 3, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Retreg3Q9CQV4 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Gm10566-201ENSMUST00000086739 996 ntBASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC16.94■□□□□ 0.3
Retreg3Q9CQV4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Gm18959-201ENSMUST00000208954 655 ntBASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retreg3Q9CQV4 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Dph1-201ENSMUST00000044949 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Gm10819-201ENSMUST00000099988 561 ntBASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Spsb2-203ENSMUST00000112473 1322 ntBASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC16.92■□□□□ 0.3
Retreg3Q9CQV4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Gm37744-201ENSMUST00000194616 1590 ntBASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Gm10013-201ENSMUST00000106074 672 ntBASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Gm10459-201ENSMUST00000202708 1155 ntBASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.91■□□□□ 0.3
Retreg3Q9CQV4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Gm16061-201ENSMUST00000122167 857 ntBASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Gm37319-201ENSMUST00000193500 636 ntBASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Gm45251-201ENSMUST00000209486 1465 ntBASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Retreg3Q9CQV4 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms