Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Eif5a-209ENSMUST00000108612 1259 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 AC114678.1-201ENSMUST00000219640 622 ntTSL 3 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Zmynd11-207ENSMUST00000110638 4003 ntTSL 5 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Nabp2-202ENSMUST00000164199 1371 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Grtp1-207ENSMUST00000211128 1416 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Npdc1-201ENSMUST00000055921 1412 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
RTRAFQ9CQE8 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Gm10382-201ENSMUST00000100700 1233 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Hebp2-202ENSMUST00000213153 968 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Krtap5-4-201ENSMUST00000061403 1046 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Dsel-201ENSMUST00000035462 5759 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
RTRAFQ9CQE8 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTRAFQ9CQE8 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTRAFQ9CQE8 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTRAFQ9CQE8 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC13.77□□□□□ -0.2
RTRAFQ9CQE8 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.2
RTRAFQ9CQE8 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
RTRAFQ9CQE8 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 CT010467.1-202ENSMUST00000205406 714 ntBASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Htr3a-201ENSMUST00000003826 2082 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Clic1-201ENSMUST00000007257 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Kif1c-203ENSMUST00000102554 6684 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
RTRAFQ9CQE8 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Tspyl2-201ENSMUST00000044509 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC13.76□□□□□ -0.21
RTRAFQ9CQE8 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms