Protein–RNA interactions for Protein: Q9CQC2

Clps, Colipase, mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClpsQ9CQC2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Gm11841-201ENSMUST00000117060 1963 ntBASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Gm15635-204ENSMUST00000208024 2539 ntBASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
ClpsQ9CQC2 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Gm18421-201ENSMUST00000204122 625 ntBASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
ClpsQ9CQC2 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Zfp264-201ENSMUST00000208656 1563 ntBASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Gm6623-201ENSMUST00000173570 544 ntBASIC16.47■□□□□ 0.23
ClpsQ9CQC2 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
ClpsQ9CQC2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Itsn1-206ENSMUST00000113999 5393 ntTSL 5 BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
ClpsQ9CQC2 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
ClpsQ9CQC2 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
ClpsQ9CQC2 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
ClpsQ9CQC2 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Gm21362-201ENSMUST00000194272 928 ntBASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Gm29707-201ENSMUST00000196325 491 ntBASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
ClpsQ9CQC2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
ClpsQ9CQC2 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms