Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Gm26571-201ENSMUST00000181399 666 ntBASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Gm42569-201ENSMUST00000200539 472 ntBASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Gm16386-201ENSMUST00000181397 1423 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Krt88Q9CPR6 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Gm7290-201ENSMUST00000104990 617 ntBASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Gm12918-201ENSMUST00000120234 636 ntBASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Gm15710-201ENSMUST00000121821 636 ntBASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Gm5075-201ENSMUST00000196916 622 ntBASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Slc16a3-202ENSMUST00000100130 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC15.24■□□□□ 0.03
Krt88Q9CPR6 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Cdkn2a-201ENSMUST00000060501 852 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 AC069562.2-201ENSMUST00000224644 2146 ntBASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Krt88Q9CPR6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 A730056A06Rik-202ENSMUST00000206959 526 ntTSL 3 BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 AC164629.5-201ENSMUST00000220387 632 ntBASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Krt88Q9CPR6 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt88Q9CPR6 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt88Q9CPR6 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Krt88Q9CPR6 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt88Q9CPR6 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt88Q9CPR6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Krt88Q9CPR6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Krt88Q9CPR6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.21■□□□□ 0.03
Krt88Q9CPR6 Gadd45b-201ENSMUST00000015456 1284 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 76.6 ms