Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Gm13616-201ENSMUST00000120600 222 ntBASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cdh23Q99PF4 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Tcp11-202ENSMUST00000043925 1746 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cdh23Q99PF4 Mir3113-201ENSMUST00000175478 76 ntBASIC17.17■□□□□ 0.34
Cdh23Q99PF4 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC17.17■□□□□ 0.34
Cdh23Q99PF4 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh23Q99PF4 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh23Q99PF4 Gm27000-201ENSMUST00000182943 842 ntBASIC17.17■□□□□ 0.34
Cdh23Q99PF4 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
Cdh23Q99PF4 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh23Q99PF4 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh23Q99PF4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Cdh23Q99PF4 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC17.17■□□□□ 0.34
Cdh23Q99PF4 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Cdh23Q99PF4 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Gm45231-201ENSMUST00000208629 1064 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
Cdh23Q99PF4 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.15■□□□□ 0.34
Cdh23Q99PF4 A530010L16Rik-201ENSMUST00000212007 2336 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Gm15500-202ENSMUST00000071641 1019 ntBASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Gm43213-201ENSMUST00000151866 1790 ntBASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 F8a-201ENSMUST00000105111 2505 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Thap3-202ENSMUST00000105665 832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Cdh23Q99PF4 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC17.14■□□□□ 0.34
Cdh23Q99PF4 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 AA543401-201ENSMUST00000164248 1269 ntBASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Cdh23Q99PF4 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Styxl1-204ENSMUST00000111163 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Cdh23Q99PF4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 17.5 ms