Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scrt1Q99M85 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.77□□□□□ -0.05
Scrt1Q99M85 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Scrt1Q99M85 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.76□□□□□ -0.05
Scrt1Q99M85 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Olfr129-201ENSMUST00000122318 993 ntBASIC14.76□□□□□ -0.05
Scrt1Q99M85 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 AC164629.2-201ENSMUST00000217916 270 ntBASIC14.76□□□□□ -0.05
Scrt1Q99M85 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Gm45447-201ENSMUST00000209874 1805 ntTSL 5 BASIC14.76□□□□□ -0.05
Scrt1Q99M85 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.75□□□□□ -0.05
Scrt1Q99M85 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
Scrt1Q99M85 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.75□□□□□ -0.05
Scrt1Q99M85 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Tfap4-201ENSMUST00000005862 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Gm10461-201ENSMUST00000202073 4786 ntBASIC14.74□□□□□ -0.05
Scrt1Q99M85 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Gm9731-201ENSMUST00000209480 747 ntBASIC14.74□□□□□ -0.05
Scrt1Q99M85 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Gm9194-201ENSMUST00000220749 1447 ntBASIC14.74□□□□□ -0.05
Scrt1Q99M85 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Scrt1Q99M85 Gm28265-201ENSMUST00000188201 2319 ntBASIC14.74□□□□□ -0.05
Scrt1Q99M85 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Gm42918-201ENSMUST00000199249 1580 ntBASIC14.73□□□□□ -0.05
Scrt1Q99M85 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Gm28659-201ENSMUST00000188013 759 ntBASIC14.73□□□□□ -0.05
Scrt1Q99M85 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 AC120002.2-201ENSMUST00000220205 773 ntBASIC14.73□□□□□ -0.05
Scrt1Q99M85 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC14.73□□□□□ -0.05
Scrt1Q99M85 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Atp8b2-201ENSMUST00000069805 5559 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Scrt1Q99M85 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 20.9 ms