Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.81■□□□□ 0.92
RtcbQ99LF4 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
RtcbQ99LF4 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RtcbQ99LF4 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
RtcbQ99LF4 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.8■□□□□ 0.92
RtcbQ99LF4 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC20.8■□□□□ 0.92
RtcbQ99LF4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Iqsec1-210ENSMUST00000212100 3500 ntTSL 5 BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
RtcbQ99LF4 Anapc5-203ENSMUST00000196640 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RtcbQ99LF4 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
RtcbQ99LF4 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
RtcbQ99LF4 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RtcbQ99LF4 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RtcbQ99LF4 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RtcbQ99LF4 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC20.79■□□□□ 0.92
RtcbQ99LF4 AC154527.4-201ENSMUST00000224364 1667 ntBASIC20.79■□□□□ 0.92
RtcbQ99LF4 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
RtcbQ99LF4 Shc2-201ENSMUST00000020564 3243 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
RtcbQ99LF4 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
RtcbQ99LF4 Dmtn-210ENSMUST00000228824 2377 ntBASIC20.79■□□□□ 0.92
RtcbQ99LF4 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Rbfox2-207ENSMUST00000227533 1041 ntBASIC20.78■□□□□ 0.92
RtcbQ99LF4 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
RtcbQ99LF4 Wdsub1-201ENSMUST00000028368 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RtcbQ99LF4 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RtcbQ99LF4 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RtcbQ99LF4 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RtcbQ99LF4 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
RtcbQ99LF4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
RtcbQ99LF4 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
RtcbQ99LF4 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
RtcbQ99LF4 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RtcbQ99LF4 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
RtcbQ99LF4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
RtcbQ99LF4 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Gm15467-201ENSMUST00000120582 445 ntBASIC20.76■□□□□ 0.91
RtcbQ99LF4 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Gm27702-201ENSMUST00000184512 56 ntBASIC20.76■□□□□ 0.91
RtcbQ99LF4 Rnf13-209ENSMUST00000199041 1062 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
RtcbQ99LF4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Psmb5-202ENSMUST00000227257 622 ntBASIC20.75■□□□□ 0.91
RtcbQ99LF4 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
RtcbQ99LF4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms