Protein–RNA interactions for Protein: Q99LE3

Lysmd3, LysM and putative peptidoglycan-binding domain-containing protein 3, mousemouse

Predictions only

Length 305 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd3Q99LE3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Lysmd3Q99LE3 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Gm9013-201ENSMUST00000132939 882 ntBASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
Lysmd3Q99LE3 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Tfap2a-209ENSMUST00000225180 1828 ntBASIC17.49■□□□□ 0.39
Lysmd3Q99LE3 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Gm33142-201ENSMUST00000193913 867 ntBASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Lysmd3Q99LE3 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Gm37722-201ENSMUST00000193757 208 ntBASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Gm21362-201ENSMUST00000194272 928 ntBASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Gm7367-201ENSMUST00000057611 492 ntBASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Lysmd3Q99LE3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Lysmd3Q99LE3 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 36.9 ms