Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Rps4l-201ENSMUST00000071745 943 ntBASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Cstf1Q99LC2 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Gm11594-201ENSMUST00000122313 162 ntBASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Cstf1Q99LC2 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Gm15372-201ENSMUST00000120729 834 ntBASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Gm2213-201ENSMUST00000197485 688 ntBASIC16.79■□□□□ 0.28
Cstf1Q99LC2 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
Cstf1Q99LC2 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Gm1401-201ENSMUST00000122048 772 ntBASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Cstf1Q99LC2 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Ube2f-204ENSMUST00000178627 1363 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Zkscan4-202ENSMUST00000225845 1506 ntBASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Gm8000-201ENSMUST00000188378 592 ntBASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Slain2-201ENSMUST00000143829 4828 ntTSL 5 BASIC16.77■□□□□ 0.28
Cstf1Q99LC2 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Cstf1Q99LC2 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.77■□□□□ 0.27
Cstf1Q99LC2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cstf1Q99LC2 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cstf1Q99LC2 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Cstf1Q99LC2 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms