Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC17.78■□□□□ 0.44
Usp11Q99K46 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.78■□□□□ 0.44
Usp11Q99K46 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Gm10252-201ENSMUST00000209541 832 ntBASIC17.78■□□□□ 0.44
Usp11Q99K46 Stard10-211ENSMUST00000210192 1258 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp11Q99K46 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Gna12-201ENSMUST00000000153 3416 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.78■□□□□ 0.44
Usp11Q99K46 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Usp11Q99K46 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Usp11Q99K46 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp11Q99K46 Gm7712-202ENSMUST00000222331 1510 ntBASIC17.77■□□□□ 0.44
Usp11Q99K46 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Usp11Q99K46 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp11Q99K46 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp11Q99K46 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.77■□□□□ 0.44
Usp11Q99K46 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
Usp11Q99K46 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC17.77■□□□□ 0.44
Usp11Q99K46 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp11Q99K46 Gm10517-202ENSMUST00000192970 758 ntBASIC17.77■□□□□ 0.44
Usp11Q99K46 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp11Q99K46 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Usp11Q99K46 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp11Q99K46 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp11Q99K46 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC17.77■□□□□ 0.43
Usp11Q99K46 Slc35f2-201ENSMUST00000048670 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Usp11Q99K46 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp11Q99K46 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp11Q99K46 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC17.76■□□□□ 0.43
Usp11Q99K46 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.76■□□□□ 0.43
Usp11Q99K46 Gm4974-201ENSMUST00000209974 875 ntBASIC17.76■□□□□ 0.43
Usp11Q99K46 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Usp11Q99K46 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Usp11Q99K46 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.76■□□□□ 0.43
Usp11Q99K46 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
Usp11Q99K46 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Usp11Q99K46 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Usp11Q99K46 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.75■□□□□ 0.43
Usp11Q99K46 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
Usp11Q99K46 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.75■□□□□ 0.43
Usp11Q99K46 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC17.75■□□□□ 0.43
Usp11Q99K46 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Usp11Q99K46 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC17.75■□□□□ 0.43
Usp11Q99K46 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Usp11Q99K46 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.75■□□□□ 0.43
Usp11Q99K46 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Usp11Q99K46 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Usp11Q99K46 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Usp11Q99K46 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Mir5122-201ENSMUST00000175004 89 ntBASIC17.74■□□□□ 0.43
Usp11Q99K46 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.74■□□□□ 0.43
Usp11Q99K46 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Usp11Q99K46 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Usp11Q99K46 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms