Protein–RNA interactions for Protein: Q99J95

Cdk9, Cyclin-dependent kinase 9, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk9Q99J95 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Osbpl1a-206ENSMUST00000121774 2931 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Cdk9Q99J95 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Cdk9Q99J95 Gm19430-201ENSMUST00000193847 2137 ntBASIC17■□□□□ 0.31
Cdk9Q99J95 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC17■□□□□ 0.31
Cdk9Q99J95 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17■□□□□ 0.31
Cdk9Q99J95 Gm2399-201ENSMUST00000104944 225 ntBASIC17■□□□□ 0.31
Cdk9Q99J95 Mir5133-201ENSMUST00000174955 77 ntBASIC17■□□□□ 0.31
Cdk9Q99J95 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC17■□□□□ 0.31
Cdk9Q99J95 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 Gm6365-201ENSMUST00000054711 744 ntBASIC17■□□□□ 0.31
Cdk9Q99J95 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC17■□□□□ 0.31
Cdk9Q99J95 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17■□□□□ 0.31
Cdk9Q99J95 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Cdk9Q99J95 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Galnt13-204ENSMUST00000112636 7530 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Zfp783-201ENSMUST00000095946 670 ntBASIC16.99■□□□□ 0.31
Cdk9Q99J95 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Lhx3-202ENSMUST00000054099 2184 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Cdk9Q99J95 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Mzf1-202ENSMUST00000182087 2197 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.98■□□□□ 0.31
Cdk9Q99J95 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
Cdk9Q99J95 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 AC133083.1-201ENSMUST00000221736 2209 ntBASIC16.97■□□□□ 0.31
Cdk9Q99J95 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
Cdk9Q99J95 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Gm7290-201ENSMUST00000104990 617 ntBASIC16.97■□□□□ 0.31
Cdk9Q99J95 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Cdk9Q99J95 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 55.3 ms