Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.06■□□□□ 0
Thumpd1Q99J36 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Thumpd1Q99J36 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd1Q99J36 Agtr1a-201ENSMUST00000066412 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd1Q99J36 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd1Q99J36 Sdk1-202ENSMUST00000085774 10352 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd1Q99J36 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC15.05■□□□□ 0
Thumpd1Q99J36 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd1Q99J36 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.05■□□□□ 0
Thumpd1Q99J36 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Thumpd1Q99J36 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.05■□□□□ -0
Thumpd1Q99J36 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.05■□□□□ -0
Thumpd1Q99J36 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.05■□□□□ -0
Thumpd1Q99J36 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.05■□□□□ -0
Thumpd1Q99J36 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.05■□□□□ -0
Thumpd1Q99J36 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Thumpd1Q99J36 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Thumpd1Q99J36 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Thumpd1Q99J36 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Thumpd1Q99J36 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.04■□□□□ -0
Thumpd1Q99J36 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
Thumpd1Q99J36 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.04■□□□□ -0
Thumpd1Q99J36 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.04■□□□□ -0
Thumpd1Q99J36 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC15.04■□□□□ -0
Thumpd1Q99J36 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
Thumpd1Q99J36 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.04■□□□□ -0
Thumpd1Q99J36 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.04■□□□□ -0
Thumpd1Q99J36 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Thumpd1Q99J36 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Thumpd1Q99J36 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Rhot1-201ENSMUST00000017831 3029 ntTSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC15.03■□□□□ -0
Thumpd1Q99J36 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Gm4968-201ENSMUST00000071458 858 ntBASIC15.03■□□□□ -0
Thumpd1Q99J36 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Thumpd1Q99J36 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Thumpd1Q99J36 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Thumpd1Q99J36 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.02■□□□□ -0
Thumpd1Q99J36 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Thumpd1Q99J36 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC15.02■□□□□ -0
Thumpd1Q99J36 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Thumpd1Q99J36 4930444P10Rik-203ENSMUST00000151004 1001 ntAPPRIS P2 TSL 3 BASIC15.02■□□□□ -0
Thumpd1Q99J36 Stx6-209ENSMUST00000195302 955 ntTSL 1 (best) BASIC15.02■□□□□ -0
Thumpd1Q99J36 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Thumpd1Q99J36 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.02□□□□□ -0.01
Thumpd1Q99J36 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC15.02□□□□□ -0.01
Thumpd1Q99J36 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
Thumpd1Q99J36 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Thumpd1Q99J36 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Ppp4r1l-ps-204ENSMUST00000140992 367 ntTSL 3 BASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Gm2559-201ENSMUST00000201323 363 ntBASIC15.01□□□□□ -0.01
Thumpd1Q99J36 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms