Protein–RNA interactions for Protein: Q923P0

Col20a1, Collagen alpha-1(XX) chain, mousemouse

Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col20a1Q923P0 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC19.89■□□□□ 0.77
Col20a1Q923P0 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Zfp264-201ENSMUST00000208656 1563 ntBASIC19.89■□□□□ 0.77
Col20a1Q923P0 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Zfp644-204ENSMUST00000112696 5785 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Col20a1Q923P0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Col20a1Q923P0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col20a1Q923P0 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col20a1Q923P0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC19.87■□□□□ 0.77
Col20a1Q923P0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC19.87■□□□□ 0.77
Col20a1Q923P0 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col20a1Q923P0 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
Col20a1Q923P0 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC19.87■□□□□ 0.77
Col20a1Q923P0 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Col20a1Q923P0 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col20a1Q923P0 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Col20a1Q923P0 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Col20a1Q923P0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.86■□□□□ 0.77
Col20a1Q923P0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Gm16499-203ENSMUST00000204633 2177 ntBASIC19.86■□□□□ 0.77
Col20a1Q923P0 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Gm35154-202ENSMUST00000217008 1093 ntTSL 5 BASIC19.86■□□□□ 0.77
Col20a1Q923P0 AC107711.5-202ENSMUST00000226429 702 ntBASIC19.86■□□□□ 0.77
Col20a1Q923P0 Nr1h3-202ENSMUST00000111354 1738 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.86■□□□□ 0.77
Col20a1Q923P0 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Col20a1Q923P0 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col20a1Q923P0 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Gm14464-201ENSMUST00000119658 1254 ntBASIC19.85■□□□□ 0.77
Col20a1Q923P0 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Gm10461-201ENSMUST00000202073 4786 ntBASIC19.85■□□□□ 0.77
Col20a1Q923P0 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Col20a1Q923P0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Lcn12-202ENSMUST00000114245 619 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Col20a1Q923P0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Col20a1Q923P0 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms