Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc1bQ920F6 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smc1bQ920F6 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Smc1bQ920F6 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 AC121961.1-201ENSMUST00000218594 1779 ntBASIC19.4■□□□□ 0.7
Smc1bQ920F6 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Scml4-203ENSMUST00000105495 1033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC19.4■□□□□ 0.7
Smc1bQ920F6 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smc1bQ920F6 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smc1bQ920F6 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.7
Smc1bQ920F6 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smc1bQ920F6 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smc1bQ920F6 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smc1bQ920F6 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smc1bQ920F6 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smc1bQ920F6 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
Smc1bQ920F6 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
Smc1bQ920F6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Pemt-203ENSMUST00000102693 961 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Wnt10b-202ENSMUST00000166022 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc1bQ920F6 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smc1bQ920F6 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Gm27742-201ENSMUST00000184667 60 ntBASIC19.38■□□□□ 0.69
Smc1bQ920F6 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Gm38345-201ENSMUST00000192635 1748 ntBASIC19.38■□□□□ 0.69
Smc1bQ920F6 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Igdcc4-205ENSMUST00000213533 6220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Igdcc4-201ENSMUST00000035499 6223 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smc1bQ920F6 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Tsks-201ENSMUST00000080233 1806 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Gm37194-201ENSMUST00000193092 3031 ntBASIC19.37■□□□□ 0.69
Smc1bQ920F6 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
Smc1bQ920F6 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc1bQ920F6 Fstl3-201ENSMUST00000020575 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc1bQ920F6 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smc1bQ920F6 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
Smc1bQ920F6 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc1bQ920F6 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc1bQ920F6 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc1bQ920F6 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smc1bQ920F6 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms