Protein–RNA interactions for Protein: Q91Y19

Pcdha11, Protocadherin alpha 11, mousemouse

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha11Q91Y19 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Pou2f2-202ENSMUST00000108413 1599 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pcdha11Q91Y19 Lmo4-203ENSMUST00000121796 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Gm11355-201ENSMUST00000121120 306 ntBASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pcdha11Q91Y19 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 S1pr5-201ENSMUST00000122088 2500 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Gm38282-201ENSMUST00000192751 695 ntTSL 5 BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Mtnr1b-201ENSMUST00000057920 1095 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Fbxo36-201ENSMUST00000097672 901 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Il9r-204ENSMUST00000142396 1542 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pcdha11Q91Y19 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha11Q91Y19 Tmem198-201ENSMUST00000050899 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha11Q91Y19 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha11Q91Y19 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pcdha11Q91Y19 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Gm25016-201ENSMUST00000158399 131 ntBASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Tnrc6c-202ENSMUST00000106344 8847 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pcdha11Q91Y19 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Pcdha11Q91Y19 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 46.3 ms