Protein–RNA interactions for Protein: Q91Y11

Pcdha9, Protocadherin alpha-9, mousemouse

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha9Q91Y11 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Pcdha9Q91Y11 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Timm44-201ENSMUST00000003029 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Dcxr-202ENSMUST00000106148 830 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Gm10231-201ENSMUST00000181584 441 ntBASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Gm10175-202ENSMUST00000208752 441 ntBASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Pcdha9Q91Y11 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Gm18032-201ENSMUST00000222541 538 ntBASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Gm10566-201ENSMUST00000086739 996 ntBASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Pcdha9Q91Y11 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Rasd1-201ENSMUST00000062405 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Pcdha9Q91Y11 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
Pcdha9Q91Y11 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Gm26039-201ENSMUST00000158152 144 ntBASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Gm22697-201ENSMUST00000175194 63 ntBASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Gm18101-201ENSMUST00000215769 548 ntBASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Pcdha9Q91Y11 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Pcdha9Q91Y11 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms