Protein–RNA interactions for Protein: Q91Y08

Pcdhb1, Protocadherin beta 1, mousemouse

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb1Q91Y08 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Pcdhb1Q91Y08 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 AL672049.1-201ENSMUST00000197943 91 ntBASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Pcdhb1Q91Y08 Haglr-201ENSMUST00000100000 2085 ntBASIC17.52■□□□□ 0.39
Pcdhb1Q91Y08 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
Pcdhb1Q91Y08 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Pcdhb1Q91Y08 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Gm4217-201ENSMUST00000182243 1002 ntBASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Gm30025-201ENSMUST00000218555 728 ntBASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Pcdhb1Q91Y08 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Pcdhb1Q91Y08 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Gm15743-202ENSMUST00000182690 1901 ntBASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Pcdhb1Q91Y08 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Pcdhb1Q91Y08 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms