Protein–RNA interactions for Protein: Q91Y02

Pcdhb18, Protocadherin beta-18, mousemouse

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb18Q91Y02 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Cxcl14-202ENSMUST00000224801 1467 ntBASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Pcdhb18Q91Y02 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Gm7292-201ENSMUST00000194706 2527 ntBASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Pcdhb18Q91Y02 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Pcdhb18Q91Y02 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Il17re-201ENSMUST00000053569 1898 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Pcdhb18Q91Y02 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Lce1a2-201ENSMUST00000029530 715 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Pcdhb18Q91Y02 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb18Q91Y02 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
Pcdhb18Q91Y02 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb18Q91Y02 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb18Q91Y02 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Pcdhb18Q91Y02 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC17.58■□□□□ 0.41
Pcdhb18Q91Y02 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Phtf1-203ENSMUST00000090685 3006 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Pcdhb18Q91Y02 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms