Protein–RNA interactions for Protein: Q91XZ2

Pcdhb8, Protocadherin beta-8, mousemouse

Predictions only

Length 779 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb8Q91XZ2 Otx2os1-204ENSMUST00000227221 751 ntBASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Pcdhb8Q91XZ2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.46■□□□□ 0.22
Pcdhb8Q91XZ2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Nmnat3-203ENSMUST00000112938 848 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Odf3b-204ENSMUST00000227834 930 ntBASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Mmp17-201ENSMUST00000031390 6422 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Pcdhb8Q91XZ2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Il3ra-202ENSMUST00000223589 738 ntBASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Arhgef33-211ENSMUST00000225658 473 ntBASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC16.44■□□□□ 0.22
Pcdhb8Q91XZ2 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Gm3375-201ENSMUST00000203929 796 ntBASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Pcdhb8Q91XZ2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Qprt-201ENSMUST00000032912 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Gm20628-201ENSMUST00000177363 3215 ntBASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Arhgef4-208ENSMUST00000211073 171 ntBASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Pcdhb8Q91XZ2 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.7 ms