Protein–RNA interactions for Protein: Q91XY5

Pcdhga3, Protocadherin gamma A3, mousemouse

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga3Q91XY5 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Mir1199-201ENSMUST00000117015 119 ntBASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 AC153881.1-201ENSMUST00000214448 284 ntBASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Pcdhga3Q91XY5 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC15.03■□□□□ -0
Pcdhga3Q91XY5 Gm42918-201ENSMUST00000199249 1580 ntBASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC15.02■□□□□ -0
Pcdhga3Q91XY5 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC15.02□□□□□ -0.01
Pcdhga3Q91XY5 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdhga3Q91XY5 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga3Q91XY5 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga3Q91XY5 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdhga3Q91XY5 Gm26917-202ENSMUST00000192833 3329 ntBASIC15.02□□□□□ -0.01
Pcdhga3Q91XY5 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdhga3Q91XY5 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Gm24841-201ENSMUST00000158676 357 ntBASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 AC175538.1-201ENSMUST00000225343 1269 ntBASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Gm7712-202ENSMUST00000222331 1510 ntBASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdhga3Q91XY5 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Gm5297-201ENSMUST00000198555 1171 ntBASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdhga3Q91XY5 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdhga3Q91XY5 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 47.3 ms