Protein–RNA interactions for Protein: Q91XY2

Pcdhga6, Protocadherin gamma A6, mousemouse

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga6Q91XY2 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga6Q91XY2 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
Pcdhga6Q91XY2 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga6Q91XY2 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Pcdhga6Q91XY2 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC16.76■□□□□ 0.27
Pcdhga6Q91XY2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Tulp3-205ENSMUST00000157005 1053 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Gm37935-201ENSMUST00000192012 982 ntBASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Rpl3l-202ENSMUST00000170239 1375 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Pcdhga6Q91XY2 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Slc6a8-204ENSMUST00000114467 2509 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Tdrd12-201ENSMUST00000032701 1620 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Gm38345-201ENSMUST00000192635 1748 ntBASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Mir770-201ENSMUST00000103252 94 ntBASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Gm27459-201ENSMUST00000184860 107 ntBASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 AC120002.2-201ENSMUST00000220205 773 ntBASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Gm7292-201ENSMUST00000194706 2527 ntBASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Adam33-201ENSMUST00000052104 2795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
Pcdhga6Q91XY2 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Csnk1a1-206ENSMUST00000165721 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Cldn7-204ENSMUST00000108597 913 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 2310009B15Rik-201ENSMUST00000112025 565 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Zfp768-201ENSMUST00000060783 2356 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC16.73■□□□□ 0.27
Pcdhga6Q91XY2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhga6Q91XY2 Gm43347-201ENSMUST00000200226 580 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 21.4 ms