Protein–RNA interactions for Protein: Q91XX7

Pcdhgb2, Protocadherin gamma B2, mousemouse

Predictions only

Length 928 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb2Q91XX7 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgb2Q91XX7 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgb2Q91XX7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgb2Q91XX7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhgb2Q91XX7 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Pcdhgb2Q91XX7 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgb2Q91XX7 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Pcdhgb2Q91XX7 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Gm44672-201ENSMUST00000206944 1098 ntBASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 AC107711.5-202ENSMUST00000226429 702 ntBASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Gm36858-201ENSMUST00000194501 2391 ntBASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
Pcdhgb2Q91XX7 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Atg5-201ENSMUST00000039286 2352 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb2Q91XX7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Aaed1-202ENSMUST00000220895 2858 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Alkbh1-212ENSMUST00000185301 408 ntBASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Grp-201ENSMUST00000025395 862 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Dio3-201ENSMUST00000097228 1449 ntBASIC15.84■□□□□ 0.13
Pcdhgb2Q91XX7 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC15.83■□□□□ 0.13
Pcdhgb2Q91XX7 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgb2Q91XX7 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgb2Q91XX7 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
Pcdhgb2Q91XX7 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 AC166341.7-201ENSMUST00000221698 126 ntBASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb2Q91XX7 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhgb2Q91XX7 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms