Protein–RNA interactions for Protein: Q91XX6

Pcdhgb4, Protocadherin gamma B4, mousemouse

Predictions only

Length 912 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb4Q91XX6 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
Pcdhgb4Q91XX6 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Haglr-201ENSMUST00000100000 2085 ntBASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Gm27000-201ENSMUST00000182943 842 ntBASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Gm29994-201ENSMUST00000195495 1193 ntBASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Gm43371-201ENSMUST00000202838 1031 ntBASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Gm10812-201ENSMUST00000099864 546 ntBASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Pcdhgb4Q91XX6 Sh2b1-202ENSMUST00000205340 3366 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgb4Q91XX6 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgb4Q91XX6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgb4Q91XX6 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Pcdhgb4Q91XX6 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Olfr173-201ENSMUST00000049940 1164 ntAPPRIS P1 BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Pcdhgb4Q91XX6 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Gm7791-201ENSMUST00000219066 539 ntBASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Arhgap35-201ENSMUST00000075845 9147 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Pcdhgb4Q91XX6 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Gm3375-201ENSMUST00000203929 796 ntBASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Arhgef4-208ENSMUST00000211073 171 ntBASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 AC154532.1-201ENSMUST00000227860 965 ntBASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Tmem91-201ENSMUST00000079439 877 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Aptx-203ENSMUST00000108103 2391 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Rbm12b2-202ENSMUST00000095143 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Pcdhgb4Q91XX6 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Krt84-201ENSMUST00000023720 2570 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 AC112142.1-201ENSMUST00000228796 918 ntBASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pcdhgb4Q91XX6 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms