Protein–RNA interactions for Protein: Q91XX1

Pcdhgc3, Protocadherin gamma C3, mousemouse

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgc3Q91XX1 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
Pcdhgc3Q91XX1 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Gm26571-201ENSMUST00000181399 666 ntBASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
Pcdhgc3Q91XX1 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.14
Pcdhgc3Q91XX1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.96■□□□□ 0.14
Pcdhgc3Q91XX1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Zfp467-201ENSMUST00000101443 599 ntTSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 AC140264.2-202ENSMUST00000218746 817 ntBASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Brpf1-203ENSMUST00000113121 4603 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Zfp384-207ENSMUST00000112427 3072 ntAPPRIS P2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.95■□□□□ 0.14
Pcdhgc3Q91XX1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Pgap3-202ENSMUST00000090827 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Acbd6-201ENSMUST00000035560 5592 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC15.94■□□□□ 0.14
Pcdhgc3Q91XX1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Speg-206ENSMUST00000122266 917 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Gm7291-201ENSMUST00000199147 382 ntBASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.93■□□□□ 0.14
Pcdhgc3Q91XX1 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.92■□□□□ 0.14
Pcdhgc3Q91XX1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms