Protein–RNA interactions for Protein: Q91XD2

Lims2, LIM and senescent cell antigen-like-containing domain protein 2, mousemouse

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lims2Q91XD2 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lims2Q91XD2 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Lims2Q91XD2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lims2Q91XD2 Ogfod2-201ENSMUST00000024470 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lims2Q91XD2 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Lims2Q91XD2 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Lims2Q91XD2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Gga2-201ENSMUST00000033160 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.22■□□□□ 0.35
Lims2Q91XD2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Hotairm1-202ENSMUST00000132559 713 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Gm27704-201ENSMUST00000185094 107 ntBASIC17.22■□□□□ 0.35
Lims2Q91XD2 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.22■□□□□ 0.35
Lims2Q91XD2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Lims2Q91XD2 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Lims2Q91XD2 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Dtx3-202ENSMUST00000116229 1994 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Gm15794-201ENSMUST00000120182 631 ntBASIC17.21■□□□□ 0.35
Lims2Q91XD2 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Gm28793-201ENSMUST00000190845 413 ntTSL 5 BASIC17.21■□□□□ 0.35
Lims2Q91XD2 F420014N23Rik-202ENSMUST00000219079 659 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Ahcyl2-204ENSMUST00000115242 5152 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Lims2Q91XD2 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lims2Q91XD2 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Lims2Q91XD2 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Plekhm2-202ENSMUST00000084203 4136 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Fcgrt-203ENSMUST00000210642 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Lims2Q91XD2 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Gm8839-201ENSMUST00000121279 1645 ntBASIC17.19■□□□□ 0.34
Lims2Q91XD2 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Atxn2-201ENSMUST00000051950 4472 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Atp5b-201ENSMUST00000026459 1916 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Lims2Q91XD2 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lims2Q91XD2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lims2Q91XD2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lims2Q91XD2 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lims2Q91XD2 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Lims2Q91XD2 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Lims2Q91XD2 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Lims2Q91XD2 Ighv6-1-201ENSMUST00000193612 343 ntBASIC17.18■□□□□ 0.34
Lims2Q91XD2 Gm21362-201ENSMUST00000194272 928 ntBASIC17.18■□□□□ 0.34
Lims2Q91XD2 AC159205.3-201ENSMUST00000224614 874 ntBASIC17.18■□□□□ 0.34
Lims2Q91XD2 AC125350.1-201ENSMUST00000225115 903 ntBASIC17.18■□□□□ 0.34
Lims2Q91XD2 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms