Protein–RNA interactions for Protein: Q91X43

Sh3d19, SH3 domain-containing protein 19, mousemouse

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3d19Q91X43 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Sh3d19Q91X43 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Gm27704-201ENSMUST00000185094 107 ntBASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Sh3d19Q91X43 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Ago4-201ENSMUST00000084289 6537 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Gm7284-201ENSMUST00000131667 944 ntBASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Gm6623-201ENSMUST00000173570 544 ntBASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Tarbp1-201ENSMUST00000170518 6383 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Sh3d19Q91X43 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Gm10819-201ENSMUST00000099988 561 ntBASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Sh3d19Q91X43 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 AC130713.1-201ENSMUST00000228853 1096 ntBASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Gm43548-201ENSMUST00000197139 2353 ntBASIC17.53■□□□□ 0.4
Sh3d19Q91X43 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Sh3d19Q91X43 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Sh3d19Q91X43 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms