Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx41Q91VN6 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx41Q91VN6 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx41Q91VN6 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Ddx41Q91VN6 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ddx41Q91VN6 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Ddx41Q91VN6 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
Ddx41Q91VN6 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Ddx41Q91VN6 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Mir142hg-201ENSMUST00000123700 269 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Mir1668-201ENSMUST00000184114 107 ntBASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 4930447C04Rik-202ENSMUST00000110489 1988 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Ddx41Q91VN6 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Gm17661-201ENSMUST00000170317 270 ntBASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Gm33142-201ENSMUST00000193913 867 ntBASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Gm21559-201ENSMUST00000220638 855 ntBASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Gm8587-201ENSMUST00000076538 843 ntBASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Ddx41Q91VN6 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms