Protein–RNA interactions for Protein: Q91V48

Pcdhb21, MCG1033322, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb21Q91V48 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb21Q91V48 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb21Q91V48 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.73■□□□□ 0.27
Pcdhb21Q91V48 Gm43338-201ENSMUST00000198617 2223 ntBASIC16.73■□□□□ 0.27
Pcdhb21Q91V48 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb21Q91V48 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pcdhb21Q91V48 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Eme2-202ENSMUST00000121542 1521 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Comtd1-204ENSMUST00000177527 714 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Ripply2-201ENSMUST00000058846 503 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pcdhb21Q91V48 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Krtap5-1-202ENSMUST00000188274 742 ntBASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 AC153881.2-201ENSMUST00000214877 204 ntBASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Gm45412-201ENSMUST00000210217 2275 ntBASIC16.71■□□□□ 0.27
Pcdhb21Q91V48 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Gm18959-201ENSMUST00000208954 655 ntBASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pcdhb21Q91V48 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 AC122465.1-201ENSMUST00000220813 1209 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Pcdhb21Q91V48 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Coa6-201ENSMUST00000059093 747 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Pcdhb21Q91V48 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Pcdhb21Q91V48 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 63.5 ms