Protein–RNA interactions for Protein: Q91V10

Vsx1, Visual system homeobox 1, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vsx1Q91V10 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx1Q91V10 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx1Q91V10 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Vsx1Q91V10 H2-Q7-202ENSMUST00000076256 1523 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Vsx1Q91V10 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.26
Vsx1Q91V10 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Vsx1Q91V10 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 AC121598.2-201ENSMUST00000228376 2325 ntBASIC16.64■□□□□ 0.25
Vsx1Q91V10 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Cyp4f14-202ENSMUST00000179434 2207 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Cyp4f14-201ENSMUST00000054174 2207 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC16.64■□□□□ 0.25
Vsx1Q91V10 AC154855.1-201ENSMUST00000227353 1458 ntBASIC16.64■□□□□ 0.25
Vsx1Q91V10 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Anks6-202ENSMUST00000107747 3980 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC16.64■□□□□ 0.25
Vsx1Q91V10 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Gm11594-201ENSMUST00000122313 162 ntBASIC16.63■□□□□ 0.25
Vsx1Q91V10 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC16.63■□□□□ 0.25
Vsx1Q91V10 Hikeshi-207ENSMUST00000207309 835 ntTSL 5 BASIC16.63■□□□□ 0.25
Vsx1Q91V10 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Myh7b-201ENSMUST00000092995 6163 ntAPPRIS P1 TSL 5 BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Vsx1Q91V10 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
Vsx1Q91V10 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.62■□□□□ 0.25
Vsx1Q91V10 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC16.62■□□□□ 0.25
Vsx1Q91V10 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.62■□□□□ 0.25
Vsx1Q91V10 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 4933434E20Rik-209ENSMUST00000162114 1411 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Vsx1Q91V10 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Tgds-204ENSMUST00000228543 1594 ntBASIC16.61■□□□□ 0.25
Vsx1Q91V10 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Gm128-202ENSMUST00000107197 1289 ntTSL 2 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Vti1a-206ENSMUST00000225529 1244 ntBASIC16.61■□□□□ 0.25
Vsx1Q91V10 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Vsx1Q91V10 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms