Protein–RNA interactions for Protein: Q8VIM6

Strc, Stereocilin, mousemouse

Predictions only

Length 1,809 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
StrcQ8VIM6 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
StrcQ8VIM6 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC20.13■□□□□ 0.81
StrcQ8VIM6 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Tmem52-201ENSMUST00000023920 932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
StrcQ8VIM6 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Hoxb3os-201ENSMUST00000131275 2315 ntTSL 3 BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Prkcg-202ENSMUST00000172109 2119 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
StrcQ8VIM6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
StrcQ8VIM6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC20.12■□□□□ 0.81
StrcQ8VIM6 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Cd37-204ENSMUST00000209779 2541 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
StrcQ8VIM6 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Gm25406-201ENSMUST00000157599 105 ntBASIC20.11■□□□□ 0.81
StrcQ8VIM6 Mir3113-201ENSMUST00000175478 76 ntBASIC20.11■□□□□ 0.81
StrcQ8VIM6 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
StrcQ8VIM6 Gm37500-201ENSMUST00000192059 1443 ntBASIC20.1■□□□□ 0.81
StrcQ8VIM6 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
StrcQ8VIM6 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
StrcQ8VIM6 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC20.1■□□□□ 0.81
StrcQ8VIM6 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC20.1■□□□□ 0.81
StrcQ8VIM6 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
StrcQ8VIM6 Slc35b2-202ENSMUST00000223987 1766 ntBASIC20.1■□□□□ 0.81
StrcQ8VIM6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
StrcQ8VIM6 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
StrcQ8VIM6 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC20.1■□□□□ 0.81
StrcQ8VIM6 Zfp78-205ENSMUST00000208030 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
StrcQ8VIM6 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
StrcQ8VIM6 Fam3c-205ENSMUST00000165576 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Gm3928-201ENSMUST00000121141 1307 ntBASIC20.09■□□□□ 0.81
StrcQ8VIM6 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC20.09■□□□□ 0.81
StrcQ8VIM6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
StrcQ8VIM6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
StrcQ8VIM6 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
StrcQ8VIM6 Grk6-206ENSMUST00000224995 2971 ntBASIC20.08■□□□□ 0.81
StrcQ8VIM6 C1ql3-201ENSMUST00000061545 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
StrcQ8VIM6 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
StrcQ8VIM6 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.8
StrcQ8VIM6 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC20.08■□□□□ 0.8
StrcQ8VIM6 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
StrcQ8VIM6 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.8
StrcQ8VIM6 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
StrcQ8VIM6 Ddx41-204ENSMUST00000224765 2199 ntBASIC20.08■□□□□ 0.8
StrcQ8VIM6 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 AC123857.1-201ENSMUST00000181053 2312 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC20.07■□□□□ 0.8
StrcQ8VIM6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Tssc4-206ENSMUST00000177841 1364 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Kptn-201ENSMUST00000006178 1630 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
StrcQ8VIM6 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC20.06■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms