Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Scrib-201ENSMUST00000002603 5599 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Atad3a-201ENSMUST00000030903 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Gm14464-201ENSMUST00000119658 1254 ntBASIC17.91■□□□□ 0.46
TraipQ8VIG6 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Calm2-201ENSMUST00000040440 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TraipQ8VIG6 Fcho2-208ENSMUST00000224992 2964 ntBASIC17.91■□□□□ 0.46
TraipQ8VIG6 Fam105a-203ENSMUST00000226170 3043 ntBASIC17.9■□□□□ 0.46
TraipQ8VIG6 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TraipQ8VIG6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
TraipQ8VIG6 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC17.89■□□□□ 0.46
TraipQ8VIG6 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
TraipQ8VIG6 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.46
TraipQ8VIG6 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TraipQ8VIG6 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Rnf181-203ENSMUST00000114095 869 ntTSL 3 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Gm7153-201ENSMUST00000117092 455 ntBASIC17.89■□□□□ 0.45
TraipQ8VIG6 Gm15372-201ENSMUST00000120729 834 ntBASIC17.89■□□□□ 0.45
TraipQ8VIG6 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Gm37280-201ENSMUST00000194583 375 ntTSL 3 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.89■□□□□ 0.45
TraipQ8VIG6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Serf2-201ENSMUST00000099475 525 ntTSL 2 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Pmm1-201ENSMUST00000023112 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
TraipQ8VIG6 Tmem127-201ENSMUST00000035871 4811 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
TraipQ8VIG6 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC17.87■□□□□ 0.45
TraipQ8VIG6 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TraipQ8VIG6 AC153889.1-201ENSMUST00000219257 330 ntBASIC17.87■□□□□ 0.45
TraipQ8VIG6 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC17.87■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms