Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Zkscan3-208ENSMUST00000224820 5398 ntBASIC17.45■□□□□ 0.38
Trim60Q8VI40 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Ppp2r1b-204ENSMUST00000174628 2195 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Trim60Q8VI40 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Pex11a-201ENSMUST00000032761 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim60Q8VI40 CT010444.2-201ENSMUST00000217877 1629 ntBASIC17.44■□□□□ 0.38
Trim60Q8VI40 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Trim60Q8VI40 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Trim60Q8VI40 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Trim60Q8VI40 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Dusp4-201ENSMUST00000033930 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Trmt13-210ENSMUST00000198454 880 ntBASIC17.43■□□□□ 0.38
Trim60Q8VI40 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Trim60Q8VI40 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.43■□□□□ 0.38
Trim60Q8VI40 Gm26774-201ENSMUST00000181534 2401 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Rbpms-203ENSMUST00000053251 2466 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Gm36858-201ENSMUST00000194501 2391 ntBASIC17.43■□□□□ 0.38
Trim60Q8VI40 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Trim60Q8VI40 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Gm26596-201ENSMUST00000180464 2655 ntBASIC17.42■□□□□ 0.38
Trim60Q8VI40 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Gm1043-204ENSMUST00000207866 4296 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Trim60Q8VI40 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC17.41■□□□□ 0.38
Trim60Q8VI40 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Trim60Q8VI40 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 49.1 ms