Protein–RNA interactions for Protein: Q8VHP8

Rab40b, Ras-related protein Rab-40B, mousemouse

Predictions only

Length 278 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab40bQ8VHP8 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Gm5408-201ENSMUST00000197998 747 ntBASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Gm5874-201ENSMUST00000096101 508 ntBASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Lrrc73-201ENSMUST00000095262 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rab40bQ8VHP8 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Tulp1-202ENSMUST00000114794 1738 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rab40bQ8VHP8 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Pole4-204ENSMUST00000160281 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Gm9970-201ENSMUST00000068997 558 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Gramd3-201ENSMUST00000070166 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Hnrnpl-202ENSMUST00000172529 1898 ntTSL 5 BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Rab40bQ8VHP8 Tmem114-201ENSMUST00000023400 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Rnf168-203ENSMUST00000171474 4460 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Pacs2-202ENSMUST00000220541 3101 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Rab40bQ8VHP8 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Gm13148-201ENSMUST00000118892 745 ntBASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Rab40bQ8VHP8 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms