Protein–RNA interactions for Protein: Q8VEG0

Ccdc71, Coiled-coil domain-containing protein 71, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc71Q8VEG0 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Gm27867-201ENSMUST00000184778 125 ntBASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 AV026068-207ENSMUST00000187718 400 ntTSL 5 BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Gm44454-201ENSMUST00000198541 138 ntBASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Pdgfa-202ENSMUST00000076095 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Ccdc71Q8VEG0 Ebf3-201ENSMUST00000033378 4838 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Trmt112-ps2-201ENSMUST00000117987 378 ntBASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Gm8969-201ENSMUST00000199694 526 ntBASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 AC160338.1-201ENSMUST00000214232 705 ntBASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Agpat3-201ENSMUST00000001240 5980 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Ccdc71Q8VEG0 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Ccdc71Q8VEG0 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Hmbs-201ENSMUST00000077353 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Gm2651-201ENSMUST00000203560 838 ntBASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Gm6296-201ENSMUST00000222599 943 ntBASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Ccdc71Q8VEG0 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc71Q8VEG0 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
Ccdc71Q8VEG0 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Gm6376-201ENSMUST00000209407 580 ntBASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Gm5867-201ENSMUST00000063197 592 ntBASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Adgra2-202ENSMUST00000178514 5129 ntTSL 5 BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Cxadr-201ENSMUST00000023572 5734 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Ccdc71Q8VEG0 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Gapvd1-201ENSMUST00000028224 5695 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Gm7862-201ENSMUST00000121461 292 ntBASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC17.38■□□□□ 0.37
Ccdc71Q8VEG0 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms