Protein–RNA interactions for Protein: Q8VC97

Upb1, Beta-ureidopropionase, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upb1Q8VC97 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Rarb-207ENSMUST00000225921 2756 ntBASIC18.32■□□□□ 0.52
Upb1Q8VC97 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Upb1Q8VC97 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.32■□□□□ 0.52
Upb1Q8VC97 AL590614.2-201ENSMUST00000225374 1937 ntBASIC18.31■□□□□ 0.52
Upb1Q8VC97 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Gm27704-201ENSMUST00000185094 107 ntBASIC18.31■□□□□ 0.52
Upb1Q8VC97 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Upb1Q8VC97 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.31■□□□□ 0.52
Upb1Q8VC97 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
Upb1Q8VC97 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Upb1Q8VC97 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 AC130713.1-201ENSMUST00000228853 1096 ntBASIC18.29■□□□□ 0.52
Upb1Q8VC97 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Gm37811-201ENSMUST00000192416 2601 ntBASIC18.29■□□□□ 0.52
Upb1Q8VC97 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Upb1Q8VC97 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Gm44450-201ENSMUST00000199528 114 ntBASIC18.28■□□□□ 0.52
Upb1Q8VC97 Gm10459-201ENSMUST00000202708 1155 ntBASIC18.28■□□□□ 0.52
Upb1Q8VC97 Gm45328-201ENSMUST00000210942 917 ntBASIC18.28■□□□□ 0.52
Upb1Q8VC97 AC107711.5-202ENSMUST00000226429 702 ntBASIC18.28■□□□□ 0.52
Upb1Q8VC97 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Upb1Q8VC97 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Fbxw5-201ENSMUST00000015239 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC18.27■□□□□ 0.52
Upb1Q8VC97 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Tmem270-201ENSMUST00000047305 932 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Upb1Q8VC97 Secisbp2-202ENSMUST00000110044 1915 ntTSL 2 BASIC18.27■□□□□ 0.51
Upb1Q8VC97 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Upb1Q8VC97 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Upb1Q8VC97 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
Upb1Q8VC97 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upb1Q8VC97 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upb1Q8VC97 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Upb1Q8VC97 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 64.1 ms