Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
Rpap2Q8VC34 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Ccni-201ENSMUST00000058550 2804 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Actl10-202ENSMUST00000226583 1501 ntBASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Rpap2Q8VC34 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Gm13186-201ENSMUST00000118031 316 ntBASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Gm19426-201ENSMUST00000181711 726 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Gm7213-201ENSMUST00000215977 950 ntBASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Mrpl21-202ENSMUST00000025745 1138 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Rpap2Q8VC34 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Slc16a7-205ENSMUST00000210780 2562 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Dclk2-208ENSMUST00000194452 2066 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Rpap2Q8VC34 Ttyh1-217ENSMUST00000206869 1491 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Mir1668-201ENSMUST00000184114 107 ntBASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Rpap2Q8VC34 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC18.46■□□□□ 0.55
Rpap2Q8VC34 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Rpap2Q8VC34 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC18.46■□□□□ 0.54
Rpap2Q8VC34 Mdm1-204ENSMUST00000169817 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Gm8839-201ENSMUST00000121279 1645 ntBASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Gm6190-201ENSMUST00000220683 1374 ntBASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Gpaa1-201ENSMUST00000023221 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Rpap2Q8VC34 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 22.1 ms