Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Prr3-209ENSMUST00000174849 581 ntTSL 2 BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Gm7370-201ENSMUST00000219471 767 ntBASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Cacna1b-202ENSMUST00000070864 9655 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Zfp764-201ENSMUST00000059199 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Sh3kbp1Q8R550 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Gm37519-201ENSMUST00000191687 2210 ntBASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Dvl2-201ENSMUST00000019362 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Sh3kbp1Q8R550 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Fam149b-216ENSMUST00000225942 2151 ntAPPRIS ALT2 BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Ocel1-203ENSMUST00000110052 5285 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Sh3kbp1Q8R550 Uhmk1-201ENSMUST00000027979 7864 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Ak6-201ENSMUST00000022135 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Nagk-203ENSMUST00000113851 1323 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Sh3kbp1Q8R550 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Trp73-203ENSMUST00000105643 1916 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Gm37025-201ENSMUST00000195159 829 ntBASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Sh3kbp1Q8R550 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
Sh3kbp1Q8R550 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms