Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 AA414768-201ENSMUST00000121924 1257 ntBASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Gm6728-201ENSMUST00000178117 1065 ntBASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Chrna3Q8R4G9 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Actl10-202ENSMUST00000226583 1501 ntBASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Gm26039-201ENSMUST00000158152 144 ntBASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Gm43808-201ENSMUST00000202534 2065 ntBASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 1810013L24Rik-201ENSMUST00000023150 4066 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Chrna3Q8R4G9 Ube2z-201ENSMUST00000100528 3997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 4933428G20Rik-201ENSMUST00000056955 1425 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Gm15138-201ENSMUST00000151778 379 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Gm3272-201ENSMUST00000181181 1229 ntBASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Gm10566-201ENSMUST00000086739 996 ntBASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 P2ry1-203ENSMUST00000193943 2203 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Lhx6-205ENSMUST00000112967 3378 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Chrna3Q8R4G9 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Chrna3Q8R4G9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Chrna3Q8R4G9 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.2 ms