Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Nup85Q8R480 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Nup85Q8R480 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Nup85Q8R480 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Nup85Q8R480 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nup85Q8R480 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.32■□□□□ 0.36
Nup85Q8R480 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
Nup85Q8R480 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC17.32■□□□□ 0.36
Nup85Q8R480 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC17.32■□□□□ 0.36
Nup85Q8R480 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC17.32■□□□□ 0.36
Nup85Q8R480 Gm18959-201ENSMUST00000208954 655 ntBASIC17.32■□□□□ 0.36
Nup85Q8R480 Gadd45b-203ENSMUST00000220246 732 ntTSL 2 BASIC17.32■□□□□ 0.36
Nup85Q8R480 AC130671.1-201ENSMUST00000227384 1237 ntBASIC17.32■□□□□ 0.36
Nup85Q8R480 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Nup85Q8R480 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC17.32■□□□□ 0.36
Nup85Q8R480 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Nup85Q8R480 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Nup85Q8R480 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.31■□□□□ 0.36
Nup85Q8R480 Gm43353-201ENSMUST00000199224 1295 ntBASIC17.31■□□□□ 0.36
Nup85Q8R480 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nup85Q8R480 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
Nup85Q8R480 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Nup85Q8R480 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.3■□□□□ 0.36
Nup85Q8R480 Stambpl1-201ENSMUST00000054956 2024 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Ppp1r1b-201ENSMUST00000078694 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Snx30-201ENSMUST00000030080 7314 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Nup85Q8R480 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Gm7638-201ENSMUST00000121348 967 ntBASIC17.3■□□□□ 0.36
Nup85Q8R480 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC17.3■□□□□ 0.36
Nup85Q8R480 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Gm17661-201ENSMUST00000170317 270 ntBASIC17.3■□□□□ 0.36
Nup85Q8R480 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Nup85Q8R480 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
Nup85Q8R480 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Nup85Q8R480 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC17.29■□□□□ 0.36
Nup85Q8R480 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Nup85Q8R480 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Nup85Q8R480 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.29■□□□□ 0.36
Nup85Q8R480 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Nup85Q8R480 Gm16499-203ENSMUST00000204633 2177 ntBASIC17.28■□□□□ 0.36
Nup85Q8R480 Gm45058-201ENSMUST00000205810 766 ntBASIC17.28■□□□□ 0.36
Nup85Q8R480 Gm9731-201ENSMUST00000209480 747 ntBASIC17.28■□□□□ 0.36
Nup85Q8R480 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup85Q8R480 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Nup85Q8R480 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Nup85Q8R480 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms