Protein–RNA interactions for Protein: Q8R429

Atp2a1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp2a1Q8R429 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atp2a1Q8R429 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC18.83■□□□□ 0.61
Atp2a1Q8R429 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atp2a1Q8R429 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.61
Atp2a1Q8R429 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atp2a1Q8R429 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atp2a1Q8R429 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atp2a1Q8R429 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atp2a1Q8R429 Gm17971-201ENSMUST00000190239 806 ntBASIC18.83■□□□□ 0.6
Atp2a1Q8R429 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atp2a1Q8R429 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atp2a1Q8R429 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atp2a1Q8R429 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atp2a1Q8R429 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Map3k5-201ENSMUST00000095806 5450 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Gm27742-201ENSMUST00000184667 60 ntBASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Gm45328-201ENSMUST00000210942 917 ntBASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Gm18669-201ENSMUST00000216049 778 ntBASIC18.82■□□□□ 0.6
Atp2a1Q8R429 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Hist1h2ai-201ENSMUST00000070124 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Hist1h2an-201ENSMUST00000091751 393 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atp2a1Q8R429 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Otx2os1-206ENSMUST00000228153 787 ntBASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Atp2a1Q8R429 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.8■□□□□ 0.6
Atp2a1Q8R429 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Gm13186-201ENSMUST00000118031 316 ntBASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Gm14464-201ENSMUST00000119658 1254 ntBASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Calb2-201ENSMUST00000003754 1431 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Atp2a1Q8R429 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Gpsm3-201ENSMUST00000038244 1343 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Atp2a1Q8R429 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 25.9 ms