Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Rfc3Q8R323 Gm43338-201ENSMUST00000198617 2223 ntBASIC15.58■□□□□ 0.08
Rfc3Q8R323 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Gm6728-201ENSMUST00000178117 1065 ntBASIC15.57■□□□□ 0.08
Rfc3Q8R323 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Rfc3Q8R323 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Ipo9-201ENSMUST00000041023 6247 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Gm16061-201ENSMUST00000122167 857 ntBASIC15.56■□□□□ 0.08
Rfc3Q8R323 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Gm21362-201ENSMUST00000194272 928 ntBASIC15.56■□□□□ 0.08
Rfc3Q8R323 Gm37025-201ENSMUST00000195159 829 ntBASIC15.56■□□□□ 0.08
Rfc3Q8R323 AC134329.2-201ENSMUST00000217897 428 ntBASIC15.56■□□□□ 0.08
Rfc3Q8R323 Gm7370-201ENSMUST00000219471 767 ntBASIC15.56■□□□□ 0.08
Rfc3Q8R323 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC15.56■□□□□ 0.08
Rfc3Q8R323 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Dancr-204ENSMUST00000132389 2347 ntBASIC15.55■□□□□ 0.08
Rfc3Q8R323 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Clstn2-201ENSMUST00000035027 4365 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.55■□□□□ 0.08
Rfc3Q8R323 AA414768-201ENSMUST00000121924 1257 ntBASIC15.55■□□□□ 0.08
Rfc3Q8R323 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Gm10819-201ENSMUST00000099988 561 ntBASIC15.55■□□□□ 0.08
Rfc3Q8R323 Lad1-201ENSMUST00000038760 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Gm9867-201ENSMUST00000192212 2647 ntBASIC15.55■□□□□ 0.08
Rfc3Q8R323 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
Rfc3Q8R323 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Asnsd1-202ENSMUST00000123519 983 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
Rfc3Q8R323 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Rfc3Q8R323 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms