Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Gm43338-201ENSMUST00000198617 2223 ntBASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
Sf3a1Q8K4Z5 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Echdc2-203ENSMUST00000116307 893 ntTSL 5 BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Sf3a1Q8K4Z5 Ppp2r5d-201ENSMUST00000002839 2926 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Gm13836-201ENSMUST00000121159 501 ntBASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Enoph1-202ENSMUST00000169390 1833 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Tedc2-201ENSMUST00000024930 2166 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Sf3a1Q8K4Z5 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Fam229a-201ENSMUST00000106043 558 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Gm7213-201ENSMUST00000215977 950 ntBASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 AC121577.1-201ENSMUST00000227302 707 ntBASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Sf3a1Q8K4Z5 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Acss2-201ENSMUST00000029135 2931 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
Sf3a1Q8K4Z5 Eml2-203ENSMUST00000120595 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Gm11620-201ENSMUST00000118770 1845 ntBASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 AC158538.1-201ENSMUST00000225870 294 ntBASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
Sf3a1Q8K4Z5 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.88
Sf3a1Q8K4Z5 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC20.58■□□□□ 0.88
Sf3a1Q8K4Z5 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3a1Q8K4Z5 AL590614.2-201ENSMUST00000225374 1937 ntBASIC20.58■□□□□ 0.88
Sf3a1Q8K4Z5 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3a1Q8K4Z5 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.88
Sf3a1Q8K4Z5 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC20.58■□□□□ 0.88
Sf3a1Q8K4Z5 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.58■□□□□ 0.88
Sf3a1Q8K4Z5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Plppr3-207ENSMUST00000167250 3063 ntAPPRIS ALT2 TSL 2 BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Sf3a1Q8K4Z5 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 76,532 protein–RNA pairs in 24.8 ms