Protein–RNA interactions for Protein: Q8K2I2

Cchcr1, Coiled-coil alpha-helical rod protein 1, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cchcr1Q8K2I2 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Shroom3-201ENSMUST00000113051 6435 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Fam199x-201ENSMUST00000047852 8299 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Mir1199-201ENSMUST00000117015 119 ntBASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Gm27000-201ENSMUST00000182943 842 ntBASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC19.93■□□□□ 0.78
Cchcr1Q8K2I2 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Gm29257-201ENSMUST00000186115 639 ntBASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Timm23-208ENSMUST00000226683 750 ntBASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Cchcr1Q8K2I2 She-201ENSMUST00000050401 5733 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Gm28265-201ENSMUST00000188201 2319 ntBASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC19.91■□□□□ 0.78
Cchcr1Q8K2I2 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Gm26596-201ENSMUST00000180464 2655 ntBASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Fhl2-201ENSMUST00000008280 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Ormdl3-201ENSMUST00000052919 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
Cchcr1Q8K2I2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cchcr1Q8K2I2 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Cchcr1Q8K2I2 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Gm8520-201ENSMUST00000186517 868 ntBASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Cchcr1Q8K2I2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 AC153881.1-201ENSMUST00000214448 284 ntBASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cchcr1Q8K2I2 Gm37166-201ENSMUST00000195473 2474 ntBASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms