Protein–RNA interactions for Protein: Q8CHX7

Rftn2, Raftlin-2, mousemouse

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rftn2Q8CHX7 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Rftn2Q8CHX7 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Dpy30-201ENSMUST00000112571 790 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Gm9103-201ENSMUST00000119371 405 ntBASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Gm18421-201ENSMUST00000204122 625 ntBASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Rftn2Q8CHX7 Zfp264-201ENSMUST00000208656 1563 ntBASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 4932702P03Rik-201ENSMUST00000138447 1482 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Gm13285-201ENSMUST00000179725 1462 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Usp13-202ENSMUST00000108228 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
Rftn2Q8CHX7 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Gm27357-201ENSMUST00000183754 135 ntBASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Gm17807-201ENSMUST00000186869 298 ntBASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Ppm1a-201ENSMUST00000021514 7668 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Rftn2Q8CHX7 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC17.89■□□□□ 0.46
Rftn2Q8CHX7 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Rftn2Q8CHX7 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Gm16075-201ENSMUST00000135873 361 ntTSL 3 BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Otx2os1-206ENSMUST00000228153 787 ntBASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Gm16638-201ENSMUST00000148687 1865 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Rftn2Q8CHX7 Chtf8-206ENSMUST00000177068 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms