Protein–RNA interactions for Protein: Q8CGV4

Rdh1, MCG140848, mousemouse

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rdh1Q8CGV4 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Rdh1Q8CGV4 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Gm18115-201ENSMUST00000221209 621 ntBASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Rarb-207ENSMUST00000225921 2756 ntBASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Rdh1Q8CGV4 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Gm9103-201ENSMUST00000119371 405 ntBASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Frrs1l-201ENSMUST00000053681 6817 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Rdh1Q8CGV4 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Slc22a12-201ENSMUST00000113451 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Rdh1Q8CGV4 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Rgmb-201ENSMUST00000170578 2633 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Dcaf5-201ENSMUST00000054145 5706 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Rdh1Q8CGV4 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Rerg-204ENSMUST00000149100 635 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Gm17807-201ENSMUST00000186869 298 ntBASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Ppt2-205ENSMUST00000169067 1392 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rdh1Q8CGV4 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms