Protein–RNA interactions for Protein: Q8CGC6

Rbm28, RNA-binding protein 28, mousemouse

Known RBP Predictions only

Length 750 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbm28Q8CGC6 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Ank2-226ENSMUST00000189368 339 ntBASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 1600012H06Rik-201ENSMUST00000052691 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rbm28Q8CGC6 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Actl10-202ENSMUST00000226583 1501 ntBASIC19.92■□□□□ 0.78
Rbm28Q8CGC6 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Gm37519-201ENSMUST00000191687 2210 ntBASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rbm28Q8CGC6 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Gm9103-201ENSMUST00000119371 405 ntBASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Gm17808-201ENSMUST00000200859 894 ntBASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rbm28Q8CGC6 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Rbm28Q8CGC6 Hoxa10-201ENSMUST00000121043 1436 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Hes6-201ENSMUST00000086851 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC19.89■□□□□ 0.77
Rbm28Q8CGC6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Gm27704-201ENSMUST00000185094 107 ntBASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rbm28Q8CGC6 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms