Protein–RNA interactions for Protein: Q8CG46

Smc5, Structural maintenance of chromosomes protein 5, mousemouse

Known RBP Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc5Q8CG46 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Smc5Q8CG46 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Smc5Q8CG46 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Smc5Q8CG46 Nkx2-1-201ENSMUST00000001536 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Tlx1os-201ENSMUST00000173437 620 ntTSL 3 BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Trmt13-210ENSMUST00000198454 880 ntBASIC20.86■□□□□ 0.93
Smc5Q8CG46 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Smc5Q8CG46 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc5Q8CG46 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
Smc5Q8CG46 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC20.85■□□□□ 0.93
Smc5Q8CG46 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC20.84■□□□□ 0.93
Smc5Q8CG46 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
Smc5Q8CG46 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Krt28-201ENSMUST00000006963 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Soga1-201ENSMUST00000069098 7864 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Gm7638-201ENSMUST00000121348 967 ntBASIC20.83■□□□□ 0.93
Smc5Q8CG46 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Il3ra-202ENSMUST00000223589 738 ntBASIC20.83■□□□□ 0.93
Smc5Q8CG46 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
Smc5Q8CG46 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc5Q8CG46 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Smc5Q8CG46 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc5Q8CG46 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC20.83■□□□□ 0.92
Smc5Q8CG46 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Smc5Q8CG46 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Smc5Q8CG46 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Gm44878-201ENSMUST00000205812 1295 ntBASIC20.82■□□□□ 0.92
Smc5Q8CG46 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC20.82■□□□□ 0.92
Smc5Q8CG46 Wnt10b-204ENSMUST00000226655 1807 ntBASIC20.82■□□□□ 0.92
Smc5Q8CG46 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 17.9 ms