Protein–RNA interactions for Protein: Q8CEZ1

Smco1, Single-pass membrane and coiled-coil domain-containing protein 1, mousemouse

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smco1Q8CEZ1 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Rbpms2-201ENSMUST00000055844 1987 ntAPPRIS P2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Gm10655-201ENSMUST00000098658 1397 ntBASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Ctnna2-205ENSMUST00000161846 4018 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Smco1Q8CEZ1 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Psip1-201ENSMUST00000030207 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Gm26762-201ENSMUST00000180864 5284 ntTSL 5 BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Gm19721-201ENSMUST00000195284 1764 ntBASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Hhatl-201ENSMUST00000035110 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Smco1Q8CEZ1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Gm38285-201ENSMUST00000192928 922 ntBASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Gm28372-201ENSMUST00000188900 1876 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Mapk14-201ENSMUST00000004990 3547 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Mapk14-202ENSMUST00000062694 3547 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Gm19430-201ENSMUST00000193847 2137 ntBASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
Smco1Q8CEZ1 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Mst1-204ENSMUST00000162886 2209 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Hyi-201ENSMUST00000006562 910 ntAPPRIS P1 TSL 5 BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 1700007K13Rik-201ENSMUST00000086370 812 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Gm26674-201ENSMUST00000180770 1446 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
Smco1Q8CEZ1 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Fosl1-201ENSMUST00000025850 1707 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Cdc34b-202ENSMUST00000188741 1252 ntBASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
Smco1Q8CEZ1 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 31.1 ms