Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Gm13158-201ENSMUST00000122007 736 ntBASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Gm18025-201ENSMUST00000221733 862 ntBASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Was-201ENSMUST00000033505 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Coro1a-201ENSMUST00000032949 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Ccdc28aQ8CEI3 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Mob2-201ENSMUST00000084418 1490 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Ccdc28aQ8CEI3 Rab7-203ENSMUST00000113597 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 2610301B20Rik-201ENSMUST00000080517 2116 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc28aQ8CEI3 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Snhg6-203ENSMUST00000182580 473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Gm42545-201ENSMUST00000202755 922 ntBASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc28aQ8CEI3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Ptprj-204ENSMUST00000168621 7634 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Slc25a23-201ENSMUST00000040280 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc28aQ8CEI3 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc28aQ8CEI3 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc28aQ8CEI3 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc28aQ8CEI3 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc28aQ8CEI3 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc28aQ8CEI3 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms